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I have a Torox with Tooth and Claw and Mining Pick in his Armor Slot, as well as Divebomb with a Field Communicator. If I combine them into Predaking via the Predacon Enigma, am I required to keep Tooth and Claw in order to carry the Mining Pick to Predaking's armor slot, or can I bring the Field Communicator instead?

Once an Upgrade is legally put into a slot, it stays there, even if the ability that allowed it to be upgraded in the first place no longer applies. In your example, you could keep Mining Pick in Predakings Armor slot. Upgrades that are on characters that combine into Combiners are considered to stay in their slots, even though those slots now belong to the Combiner.
Source: Wizards of the Coast (2019-10-11)    【Link to Ruling】
Tags: Combiner